Arnas Technologies is Here: Transforming Big Data Microscopy

Welcome to the Arnas Technologies blog!

We are thrilled to announce the official launch of Arnas Technologies, a scientific imaging consultancy dedicated to solving one of the biggest challenges in modern research: turning the chaos of big data microscopy into clear, actionable, and publishable results.

In fields like lightsheet microscopy, neuroinformatics, and omics, acquiring data is often just the first step. The sheer volume and complexity of these datasets can become a bottleneck, stalling analysis and discovery.

That's where we come in.

We specialize in building intelligent, AI-enabled scientific workflows to help you make sense of your data. We partner with academic and research institutions to build the custom tools and pipelines you need to move your research forward.

We go beyond off-the-shelf solutions. We design, train, and validate custom AI models for bespoke cell detection and segmentation tasks, and expertly fine-tune established models like Cellpose and StarDist for your specific needs.

We specialize in light sheet microscopy data. Our expertise covers everything from removing image artifacts (like striping) to advanced image deconvolution — we've even developed accelerated algorithms for systems with limited computing power.

Storing massive datasets is a challenge in itself. We provide strategic consulting on modern data storage formats (like OME-Zarr) and compression strategies (like JPEG 2000) to balance image fidelity with data size.

We are proficient in Python and scientific computing, allowing us to translate, adapt, and implement cutting-edge methods from scientific literature to solve your unique data challenges.

We are available for grant sub-contracting to provide specialized data analysis, AI modeling, and algorithm development for your research projects.

We're passionate about building reproducible, scalable, and efficient workflows. Whether it's mapping cells to the Allen Brain Atlas, analyzing the impact of data compression, or building a custom AI segmentation tool from the ground up, our goal is to help you achieve impactful and publishable results.

Ready to tackle your data challenges? Reach out to us at [email protected] or visit our About page to learn more about our team.